Comparison of re-called Albacore and Flappie sequences from E. coli K-12 MG1655
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https://zenodo.org/record/2184824
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资源简介:
I used the first few (545) original Fast5 files from Nick Loman's ultra-long read E. coli K-12 MG1655 R9.4 sequencing run. See the blog post here. Direct link to the complete fast5 dataset here.
Program versions:
* Albacore 2.1.10
* Flappie 1.0.0-0048dfd
The example alignment was carried out using seaview (1:4.6.1.2-2), and visualised using spiralign from my bioinfscripts repository (see source code in this archive):
$ spiralign.r -size 2000x2000 -noalign -noborder -loops 12.75 -outfmt png -type nucl -title "Flappie vs Albacore\n(Ecoli_MG1655)" aligned_all_ddea.fa
创建时间:
2024-07-26



