Genome-wide triallelic single nucleotide polymorphisms as genetic markers to separate three chemotypes of cannabis strains

The whole-genomes of 23 cannabis strains marketed in Canada were sequenced, aligned to a reference genome assembly ASM23057v4 of a drug type strain Purple Kush (PK) in the NCBI BioProject database under accession number PRJNA73819. Here we deposited the SNP files for these 23 strains, which were used to study the genetic structure and identify genetic markers to differentiate three chemotypes strains.

本研究对加拿大市场在售的23株大麻菌株开展全基因组测序，并将测序序列比对至NCBI生物项目数据库（NCBI BioProject database）中登录号为PRJNA73819的药用型菌株‘紫 Kush（Purple Kush，PK）’的参考基因组组装ASM23057v4。本研究将这23株菌株的单核苷酸多态性（Single Nucleotide Polymorphism，SNP）文件进行了存档，这些文件被用于解析菌株的遗传结构，并鉴定可区分三种化学型菌株的遗传标记。