16S and 23S ribosomal RNA gene fragments sequenced by a MinION nanopore system were used to obtain sub-species resolution of datasets from a D6322 mock bacterial microbiome. Correct strain resolution
C. kwangsiensis RNA was used to construct cDNA libraries with fragment a length of 200 bp. Then, paired-end sequencing was performed using an Illumina HiSeq TM 2500 following the manu