five

Additional file 7: Table S5. of SABRE: a method for assessing the stability of gene modules in complex tissues and subject populations

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https://springernature.figshare.com/articles/dataset/Additional_file_7_Table_S5_of_SABRE_a_method_for_assessing_the_stability_of_gene_modules_in_complex_tissues_and_subject_populations/4402253
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Pathway over-representation analysis results for the WGCNA and Chaussabel modules sets. For each module identification strategy and module in turn, we carried out pathway over-representation analysis against the Broad Instituteâ s MSigDB collections by comparing the gene set and module membership using a simple hypergeometric test. We report both p-value and false discovery rate adjusting for multiple comparisons using the Benjamini-Hochberg procedure. (CSV 196Â kb)

本数据集包含加权基因共表达网络分析(Weighted Gene Co-expression Network Analysis, WGCNA)与肖萨尔(Chaussabel)模块集的通路过表征分析结果。针对每一种模块识别策略及其对应模块,我们通过简单超几何检验比对基因集与模块成员,针对布罗德研究所(Broad Institute)的分子特征数据库(Molecular Signatures Database, MSigDB)合集开展通路过表征分析。本次分析同时报告了P值,以及采用本杰明尼-霍赫贝格(Benjamini-Hochberg)校正法进行多重比较校正后的错误发现率。(CSV格式,文件大小196 KB)
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Figshare
创建时间:
2016-12-15
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