遇见数据集

HG007_Mother (GIAB_ChineseTrio_10X)

收藏
NIAID Data Ecosystem2026-03-14 收录
数据链接:
官方服务:

资源简介:

This is a sub-sampled version (10X) of ChineseTrio HG007(mother) fastq files published by NIST's Genome in a Bottle project. We created them for practicing variant-call processes. These files are 10X fastq files. Though 30X fastq files are preferable for WGS analysis, we prepared 10X fastq files for reducing the burden of handling the large files. The original data is available under:https://github.com/genome-in-a-bottle/giab_data_indexes The original article is below; Wang, YC., Olson, N.D., Deikus, G. et al. High-coverage, long-read sequencing of Han Chinese trio reference samples. Sci Data 6, 91 (2019). https://doi.org/10.1038/s41597-019-0098-2 We are permitted to published sub-sampled versions by Genome in a Bottle project.

本数据集为美国国家标准与技术研究院(National Institute of Standards and Technology,NIST)“瓶中基因组(Genome in a Bottle,GIAB)”项目发布的ChineseTrio HG007(母亲样本)FASTQ格式文件的10倍降采样版本。我们制备该数据集用于练习变异检测流程。本次提供的文件为10倍测序深度的FASTQ文件,尽管全基因组测序(Whole Genome Sequencing,WGS)分析更推荐使用30倍测序深度的FASTQ文件,但我们采用10倍深度文件以降低处理大体积文件的负担。 原始数据集可通过以下链接获取:https://github.com/genome-in-a-bottle/giab_data_indexes 相关原始文献如下: Wang YC、Olson ND、Deikus G 等. 汉族三联体参考样本的高覆盖度长读长测序. 《科学数据(Sci Data)》, 2019, 6:91. https://doi.org/10.1038/s41597-019-0098-2 我们已获得瓶中基因组项目授权,可发布该降采样版本数据集。

创建时间:
2022-11-11
二维码
社区交流群
二维码
科研交流群
商业服务