Genomics of Olea europaea cultivars

The files in this collection are supplemental information for the research article "Genomics of Olea europaea cultivars and the questionable nature of PCR marker counts", Richard B. Frost, 2023. Further inquiries can be directed to https://frostconcepts.org/. CONTENT SIZES Ax~=b.zip 8.7 GB Farga FNA Chromosome Data.zip 141.2 MB Farga MX Chromosome Data.zip 275.5 MB Farga TXT Chromosome Data.zip 275.4 MB Koehmstedt Data.zip 483.8 KB Mathematica.zip 429.5 MB Merged Data.zip 19.7 KB Primer Correlations.zip 12.2 GB Primer Displacements.zip 17.2 KB Primer Forms.zip 126.4 MB Primer Locations.zip 1.3 GB Primer Properties.zip 8.6 GB Profile Data.zip 90 KB Profile Distances.zip 369.1 KB Raw Accession Data.zip 1.7 MB README.txt 3.2 KB SSR Motifs.zip 7.1 GB ----------------------------- -------- Total 39.1 GB CONTENT FILE TYPES .zip zipped folders created by 7-Zip File Manager .gz GNU compressed files, can be uncompressed by 7-Zip .csv comma separated values file of tabular data .fna FASTA format chromosome sequence .pdf Adobe PDF .tsv tab separated values file of tabular data .txt ASCII text .xlsx MS Excel worksheet .m auto-generated Mathematica package file .mx can only be read by Mathematica v.12 or greater on Intel i9 platform .nb Mathematica notebook files requiring v.12 or greater Note 1: several tabular files are too large for input to standard spreadsheet programs. Note 2: nearly all .mx files have been converted to .tsv files for generic distribution. Note 3: tabular data files can contain cells with multi-dimension data, delimited by "{", ",", and "}" characters. Further parsing of these files will be necessary to use them in 3rd party software. Note 4: the directory organization for this software is specified in "0000 Olive package". Note 5: origin of a specific file can usually be found with program "0100 Notebook Text Finder". Note 6: novice users of Mathematica should not attempt to modify .nb files. CONTENT ASSOCIATIONS Folder Article section(s) ----------------------------- ----------- Koehmstedt Data.zip 1 Raw Accession Data.zip 4.2.a Profile Data.zip 4.2.b Merged Data.zip 4.2.c Profile Distances.zip 4.3 Farga FNA Chromosome Data.zip 4.5 Farga MX Chromosome Data.zip 4.5 Farga TXT Chromosome Data.zip 4.5 SSR Motifs.zip 4.6 Primer Properties.zip 4.7 Primer Correlations.zip 4.8.1 Primer Locations.zip 4.8.1 Primer Forms.zip 4.8.2.a Ax~=b.zip 4.8.2.c Primer Displacements.zip n/a Mathematica.zip source code本数据集收录的文件为研究论文《油橄榄（Olea europaea）栽培品种基因组学与聚合酶链式反应（Polymerase Chain Reaction, PCR）标记计数的可疑性》（作者Richard B. Frost，2023年）的补充材料。如需进一步咨询，请访问https://frostconcepts.org/。 ### 文件大小明细 Ax~=b.zip 8.7 GB Farga FNA染色体数据.zip 141.2 MB Farga MX染色体数据.zip 275.5 MB Farga TXT染色体数据.zip 275.4 MB Koehmstedt数据.zip 483.8 KB Mathematica.zip 429.5 MB 合并数据.zip 19.7 KB 引物相关性.zip 12.2 GB 引物位移.zip 17.2 KB 引物形式.zip 126.4 MB 引物位置.zip 1.3 GB 引物属性.zip 8.6 GB 谱系数据.zip 90 KB 谱系距离.zip 369.1 KB 原始种质数据.zip 1.7 MB README.txt 3.2 KB SSR基序（Simple Sequence Repeat）.zip 7.1 GB ----------------------------- 总大小合计39.1 GB ### 文件类型说明 .zip：由7-Zip文件管理器创建的压缩文件夹 .gz：GNU压缩文件，可通过7-Zip解压 .csv：逗号分隔值格式的表格数据文件 .fna：FASTA格式的染色体序列文件 .pdf：Adobe可移植文档格式文件 .tsv：制表符分隔值格式的表格数据文件 .txt：ASCII文本文件 .xlsx：微软Excel电子表格文件 .m：自动生成的Mathematica软件包文件 .mx：仅可在搭载Intel i9处理器的平台上通过Mathematica 12及以上版本读取 .nb：Mathematica笔记文件，需Mathematica 12及以上版本支持 ### 注释 注释1：部分表格文件体积过大，无法在标准电子表格软件中直接导入。 注释2：为便于通用分发，几乎所有.mx文件均已转换为.tsv格式文件。 注释3：表格数据文件的单元格可包含由"{"",""}"字符分隔的多维数据，若需在第三方软件中使用这些文件，需对其进行进一步解析。 注释4：本数据集的目录结构详见"0000 Olive package"文件。 注释5：可通过"0100 Notebook Text Finder"工具查询特定文件的来源信息。 注释6：Mathematica新手用户请勿尝试修改.nb格式文件。 ### 文件关联说明 | 文件名 | 对应论文章节 | | ---- | ---- | | Koehmstedt Data.zip | 1 | | Raw Accession Data.zip | 4.2.a | | Profile Data.zip | 4.2.b | | Merged Data.zip | 4.2.c | | Profile Distances.zip | 4.3 | | Farga FNA Chromosome Data.zip | 4.5 | | Farga MX Chromosome Data.zip | 4.5 | | Farga TXT Chromosome Data.zip | 4.5 | | SSR Motifs.zip | 4.6 | | Primer Properties.zip | 4.7 | | Primer Correlations.zip | 4.8.1 | | Primer Locations.zip | 4.8.1 | | Primer Forms.zip | 4.8.2.a | | Ax~=b.zip | 4.8.2.c | | Primer Displacements.zip | 无对应章节 | | Mathematica.zip | 源代码