遇见数据集

Data set accompanying the research article "Complete representation of action space and value in all striatal pathways"

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Zenodo2021-06-26 更新2026-05-25 收录
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GCaMP6s calcium imaging data set recorded from freely behaving mice performing open field and 2-choice decision-making tasks using miniscopes. Mice were implanted in the right dorsomedial striatum and three types of output neurons were genetically targeted using transgenic Cre-lines. The data set comprises single-cell spatial filters and calcium activity traces extracted using CaImAn (https://github.com/flatironinstitute/CaImAn) as well as behavioral event logs and tracking coordinates. For more details please refer to the article "Complete representation of action space and value in all striatal pathways" published by the data sets' authors. Analysis code can be found at https://doi.org/10.5281/zenodo.5034618.

本数据集为GCaMP6s钙成像数据集(GCaMP6s calcium imaging dataset),采集自执行开放场域任务与二择一决策任务的自由活动小鼠,成像采用微型显微镜(miniscopes)。实验中,小鼠被植入右侧背内侧纹状体(right dorsomedial striatum),并通过转基因Cre株系(transgenic Cre-lines)对三类输出神经元实现遗传靶向标记。数据集包含通过CaImAn软件提取得到的单细胞空间滤波器与钙活动轨迹,同时附带行为事件日志与追踪坐标。如需了解更多细节,请参阅数据集作者发表的论文《动作空间与价值在所有纹状体通路中的完整表征》("Complete representation of action space and value in all striatal pathways")。分析代码可通过链接https://doi.org/10.5281/zenodo.5034618获取。

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Zenodo
创建时间:
2021-06-26
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