Table S1. Specimen and transcriptome details from Tetraconatan phylogeny with special focus on Malacostraca and Branchiopoda: highlighting the strength of taxon-specific matrices in phylogenomics
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Details on all individuals and their transcriptomes incorporated in this study. The IZ numbers correspond to the respective registration number in the Invertebrate Zoology collection of the Museum of Comparative Zoology (MCZ; Harvard University). Transcriptomes newly sequenced for this study are marked in bold GenBank accession numbers. The adaptors refer to the PrepX library preparation kit indexing adaptors used to multiplex samples during Illumina sequencing. The number of transcripts for OMA provides the number of contigs after CD-HIT, translation with and selection of longest isoform that were used for orthology prediction with OMA
本研究纳入的所有个体及其转录组的详细信息如下。文中IZ编号对应哈佛大学比较动物学博物馆(Museum of Comparative Zoology,MCZ)无脊椎动物馆藏的相应登记号。本研究中新测序的转录组以粗体标注的基因银行 (GenBank) 登录号进行标识。所述接头指本研究中在因美纳 (Illumina) 测序流程中用于样本多重标记的PrepX文库制备试剂盒配套索引接头。OMA转录本数量指经CD-HIT聚类、翻译并筛选最长同工型后,用于OMA直系同源预测的重叠群 (contigs) 数量。
提供机构:
The Royal Society
创建时间:
2018-07-30



