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Additional file 1: of H3K27 acetylation and gene expression analysis reveals differences in placental chromatin activity in fetal growth restriction

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Mendeley Data2024-06-27 更新2024-06-27 收录
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https://springernature.figshare.com/articles/Additional_file_1_of_H3K27_acetylation_and_gene_expression_analysis_reveals_differences_in_placental_chromatin_activity_in_fetal_growth_restriction/6679481/1
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Table S1. Differentially acetylated regions in FGR compared to controls. Table S2. Genes annotated to hyper- and hypoacetylated sites in placenta of FGR using a 20-kb window. Table S3. Functional pathways related to hypo- and hyperacetylated in placenta of FGR identified by GREAT. Table S4. Up- and downregulated gene transcripts in placenta of FGR compared to controls. Table S5. RNA-seq pathways TOPPfunn. Table S6. Functional pathways related to overlapping genes in CHIP-seq and RNA-seq. Table S7. AME output: differentially acetylated TFBMâ s in placenta of FGR vs. controls and functional pathways related to differentially acetylated TFBM (XLSX 694 kb)

附表S1:与对照组相比,胎儿生长受限(Fetal Growth Restriction, FGR)样本中的差异乙酰化区域。 附表S2:采用20千碱基(20-kb)窗口分析,注释胎儿生长受限(FGR)胎盘组织中高乙酰化与低乙酰化位点的基因。 附表S3:通过GREAT工具鉴定得到的胎儿生长受限(FGR)胎盘组织中与低乙酰化、高乙酰化区域相关的功能通路。 附表S4:与对照组相比,胎儿生长受限(FGR)胎盘组织中上调与下调的基因转录本。 附表S5:基于RNA测序(RNA-seq)通路的TOPPfunn分析结果。 附表S6:与染色质免疫沉淀测序(CHIP-seq)和RNA测序(RNA-seq)共有的重叠基因相关的功能通路。 附表S7:AME工具输出结果:胎儿生长受限(FGR)胎盘组织中相较于对照组的差异乙酰化转录因子结合基序(Transcription Factor Binding Motifs, TFBM),以及与差异乙酰化转录因子结合基序相关的功能通路(XLSX格式,大小694 kb)
创建时间:
2023-06-28
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