tathagatabhattacharjee/INDEPTH-Core-Microdata-to-OMOP-CDM-Under-INSPIRE-Project: Initial Release
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Release 1.0 - INDEPTH Core Microdata to OMOP CDM Conversion (INSPIRE Project) This initial release provides resources for mapping INDEPTH Core Microdata to OMOP CDM v5.4 using Pentaho Data Integration (PDI) for ETL processes and additional SQL scripts for data transformation. The repository supports demographic surveillance data integration with OMOP CDM analytical tools like ATLAS. Key Features: Mapping specifications for core tables PDI jobs for automated ETL SQL scripts for additional support Supported OMOP CDM Tables: PERSON, OBSERVATION_PERIOD, VISIT_OCCURRENCE, VISIT_DETAIL, OBSERVATION, DEATH, LOCATION, CARE_SITE, EPISODE, EPISODE_EVENT, CDM_SOURCE. Refer to the README for detailed guidance.
1.0版发布:INDEPTH核心微观数据向OMOP通用数据模型(Observational Medical Outcomes Partnership Common Data Model,简称OMOP CDM)转换工具集(INSPIRE项目) 本次初始发布版本提供了将INDEPTH核心微观数据映射至OMOP CDM v5.4的工具资源:采用Pentaho数据集成工具(Pentaho Data Integration,简称PDI)完成抽取-转换-加载(Extract, Transform, Load,简称ETL)流程,并辅以额外的SQL脚本实现数据转换。本存储库支持人口监测数据与OMOP CDM分析工具(如ATLAS)的集成工作。 核心特性: - 核心表映射规范 - 支持自动化ETL流程的PDI作业脚本 - 额外配套的SQL辅助脚本 支持的OMOP CDM表包括: PERSON、OBSERVATION_PERIOD、VISIT_OCCURRENCE、VISIT_DETAIL、OBSERVATION、DEATH、LOCATION、CARE_SITE、EPISODE、EPISODE_EVENT、CDM_SOURCE 详细操作指南请参阅README文件。



