Additional file 1 of Combined transcriptome and metabolome analysis reveals the effects of light quality on maize hybrids

Additional file 1: Table S1. Quality detection of RNA-seq data. Table S2. The classification of differentially expressed genes in both hybrids under various light conditions. Table S3. Differentially expressed genes in the comparisons of hybrids vs mid-parent value under various light conditions. Table S4. The comparisons of F1-MPV DEGs in both hybrids and DEGs between two parents. Table S5. Gene Ontology enrichment analyses for the F1-MPV DEGs under various light conditions. Table S6. Representative Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway under various light conditions. Table S7. Details of two-way ANOVA for metabolites. Table S8. The patterns of differentially accumulated metabolites in BM and MB. Table S9. Differentially accumulated metabolites between hybrids and mid-parent values under various t light conditions. Table S10. The MPHs of specific metabolites under various light conditions. Table S11. Specific gene MPHs of RNA-seq data under various light conditions. Table S12. Primers for qRT-PCR. Table S13. Common gene MPHs of RNA-seq data under various light conditions. Table S14. The MPHs of common metabolites under various light conditions. Table S15. The biomass heterosis in maize seedlings.

附加文件1：表S1：RNA测序（RNA-seq）数据质量检测。表S2：不同光照条件下两个杂交组合的差异表达基因分类。表S3：不同光照条件下杂交组合与中亲值间比较的差异表达基因。表S4：两个杂交组合的F1-中亲值差异表达基因与两亲本间差异表达基因的比较。表S5：不同光照条件下F1-中亲值差异表达基因的基因本体（Gene Ontology, GO）富集分析。表S6：不同光照条件下代表性京都基因与基因组百科全书（Kyoto Encyclopedia of Genes and Genomes, KEGG）通路。表S7：代谢物双向方差分析详情。表S8：BM与MB中差异积累代谢物的表达模式。表S9：不同光照条件下杂交组合与中亲值间的差异积累代谢物。表S10：不同光照条件下特定代谢物的中亲杂种优势（mid-parent heterosis, MPH）。表S11：不同光照条件下RNA-seq数据的特定基因中亲杂种优势。表S12：实时定量荧光聚合酶链式反应（quantitative real-time polymerase chain reaction, qRT-PCR）引物序列。表S13：不同光照条件下RNA-seq数据的共同基因中亲杂种优势。表S14：不同光照条件下共同代谢物的中亲杂种优势。表S15：玉米幼苗生物量杂种优势。