TRACERx PHLEX test dataset, model weights & TRACERx nuclear IMC segmentation dataset

This repository contains three archives pertaining to the TRACERx PHLEX multiplexed imaging pipelines.

Weights for the deep-imcyto neural network models

The PHLEX test dataset consisting of two .ome.tiff files of imaging mass cytometry data

The TRACERx Nuclear IMC Segmentation dataset, a training dataset of IMC image tiles and ~42,000 expert labelled nuclei from diverse lung, normal and other tissue types.

本仓库包含三个与TRACERx PHLEX多重成像流水线相关的归档文件，具体如下：
1. deep-imcyto神经网络模型的权重文件；
2. PHLEX测试数据集：包含两份成像质谱流式细胞术（imaging mass cytometry）数据的.ome.tiff格式文件；
3. TRACERx 细胞核IMC分割数据集：该训练数据集涵盖IMC图像切块，以及来自多种肺部、正常及其他组织类型的约42000个经专家标注的细胞核。