遇见数据集

SpliceAI_rocksdb_hg38_chrX

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Zenodo2023-05-17 更新2026-05-26 收录
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SpliceAI RocksDB for chromosome X of hg38 as used in the AbSplice publication: https://www.nature.com/articles/s41588-023-01373-3 Precomputed SpliceAI scores for all SNVs and indels up to 4 nucleotides are stored in this database. To use this database for fast computation of SpliceAI predictions see: https://github.com/gagneurlab/spliceai_rocksdb This is also implemented in the AbSplice package: https://github.com/gagneurlab/absplice This dataset includes SpliceAI scores. The scores are free for academic and not-for-profit use; other use requires a commercial license from Illumina, Inc., see the GitHub repository of SpliceAI: https://github.com/Illumina/SpliceAI/tree/master

本数据集为AbSplice发表文献中使用的hg38参考基因组X染色体版SpliceAI RocksDB数据库,相关文献链接:https://www.nature.com/articles/s41588-023-01373-3。本数据库存储了所有长度不超过4个核苷酸的单核苷酸变异(Single Nucleotide Variants, SNVs)与插入缺失(Insertions and Deletions, indels)的预计算SpliceAI评分。若需使用本数据库快速计算SpliceAI预测结果,请参阅:https://github.com/gagneurlab/spliceai_rocksdb。该功能同样已集成至AbSplice工具包中,相关工具包链接:https://github.com/gagneurlab/absplice。本数据集包含SpliceAI评分。该评分仅对学术与非盈利用途免费开放,其他商业用途需获得Illumina公司的商业授权,相关详情请参阅SpliceAI的GitHub仓库:https://github.com/Illumina/SpliceAI/tree/master

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Zenodo
创建时间:
2023-05-17
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