Omnitrophota marker gene trees
收藏DataCite Commons2025-06-01 更新2024-07-29 收录
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https://figshare.com/articles/dataset/Omnitrophota_marker_gene_trees/19918432/1
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资源简介:
Phylogenetic trees associated with Omnitrophota marker genes. All trees are newick format. <br> rooted-16-tree.nwk : Rooted 16S rRNA gene tree. bac120-alignment-hmq-trimal.faa.treefile: Bac120 marker alignment of high and medium quality species cluster representatives. <br> bcg110-alignment-hmq-trimal.faa.treefile: "Bacterial core genome" bcg110 marker alignment of high and medium quality species cluster representatives. <br> ubcg-alignment-hmq-trimal.faa.treefile: "Up-to-date bacterial core genome" ubcg marker alignment of high and medium quality species cluster representatives. <br> uni56-alignment-hmq-trimal.faa.treefile: "universal" 56 marker alignment of high and medium quality species cluster representatives.
与Omnitrophota标记基因相关的系统发育树。所有树文件均采用Newick格式。
rooted-16-tree.nwk:带根的16S rRNA基因系统发育树。
bac120-alignment-hmq-trimal.faa.treefile:基于高质量与中等质量物种聚类代表序列的Bac120标记基因联配构建的系统发育树。
bcg110-alignment-hmq-trimal.faa.treefile:"细菌核心基因组"bcg110标记基因联配的高质量与中等质量物种聚类代表序列构建的系统发育树。
ubcg-alignment-hmq-trimal.faa.treefile:"最新细菌核心基因组"ubcg标记基因联配的高质量与中等质量物种聚类代表序列构建的系统发育树。
uni56-alignment-hmq-trimal.faa.treefile:"通用型"56标记基因联配的高质量与中等质量物种聚类代表序列构建的系统发育树。
提供机构:
figshare
创建时间:
2022-08-14



