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Supplementary Material for the Manuscript "Comparative Computational Study to Augment UbiA prenyltransferases Inherent in Purple Photosynthetic Bacteria Isolated from Mangrove Microbial Mats in Qatar for Coenzyme Q10 biosynthesis."

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资源简介:
Supplementary Material for the Manuscript titled - "Comparative Computational Study to Augment UbiA prenyltransferases Inherent in Purple Photosynthetic Bacteria Isolated from Mangrove Microbial Mats in Qatar for Coenzyme Q10 biosynthesis." <br> <strong>Supplemental Table S1.xlsx</strong> is the Dataset of Protein Sequence entries of 4-Hydroxybenzoate octaprenyl transferase derived from UniProt database. This dataset was input to MMseqs2 tool for sensitive sequence search for Clustering analysis. <strong>Supplemental Table S2.xlsx</strong> is the Dataset of Largest Cluster, Cluster-19 identified during first step of clustering using MMseqs2 tool. Protein Sequences share 30% sequence identity and 50% minimum coverage. <strong>Supplemental Table S3.xlsx </strong>is the Dataset of Largest Cluster, Cluster-35 identified during Second step of clustering using MMseqs2 tool. Protein Sequences share 40% sequence identity and 80% minimum coverage. <strong>Supplementary Material.pdf</strong> is the online resource supplemental to the manuscript.

本内容为题为"用于增强从卡塔尔红树林微生物垫中分离的紫色光合细菌所固有UbiA异戊烯转移酶(UbiA prenyltransferases)以合成辅酶Q10(Coenzyme Q10)的比较计算研究"的手稿的补充材料。<br><strong>Supplemental Table S1.xlsx</strong> 为源自UniProt数据库的4-羟基苯甲酸八异戊烯基转移酶的蛋白质序列条目数据集,该数据集被输入MMseqs2工具以开展敏感序列搜索与聚类分析。<br><strong>Supplemental Table S2.xlsx</strong> 为使用MMseqs2工具进行第一步聚类时所得到的最大聚类簇Cluster-19的数据集,其中蛋白质序列的序列一致性为30%,最小覆盖度为50%。<br><strong>Supplemental Table S3.xlsx</strong> 为使用MMseqs2工具进行第二步聚类时所得到的最大聚类簇Cluster-35的数据集,其中蛋白质序列的序列一致性为40%,最小覆盖度为80%。<br><strong>Supplementary Material.pdf</strong> 为本手稿的在线补充资源。
提供机构:
Carnegie Mellon University
创建时间:
2022-07-30
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