遇见数据集

16S rRNA raw sequences for "Bacterial interactions shape the molecular composition of dissolved organic matter"

收藏
Zenodo2025-12-16 更新2026-05-26 收录
官方服务:

资源简介:

This amplicon 16S rRNA dataset NGS3046 (raw sequences and processed data by LGC Genomics GmbH) and metadata support the publication "Bacterial interactions shape the molecular composition of dissolved organic matter" by Fuessel et al. The 16S rRNA data describe the community composition of assembled communities of up to 4 bacteria from the Roseobacter group. The co-cultures were grown in minimal artificial seawater medium with glucose and samples for DNA were taken throughout the experiment. The methods are described in detail in the publication. The ASVtable after processing through our bioinformatic pipeline as stated in the methods section of the paper is attached in the supplementary files to the publication.

本扩增子16S核糖体RNA(amplicon 16S rRNA)数据集NGS3046(包含原始序列及由德国LGC基因组学有限公司(LGC Genomics GmbH)处理得到的加工数据)及其配套元数据,可支撑Fuessel等人发表的研究论文《细菌互作塑造溶解有机物的分子组成》。 该16S核糖体RNA数据集描述了最多包含4株玫瑰杆菌类群(Roseobacter group)细菌的组装群落的群落组成。本次研究的共培养体系以添加葡萄糖的最小人工海水培养基进行培养,实验全程均采集了用于DNA提取的样本。具体实验方法已在该论文中详细阐述。按照论文方法部分所述的生物信息学分析流程处理后得到的扩增序列变体(Amplicon Sequence Variant,ASV)表,已作为补充材料附于该论文的附属文件中。

提供机构:
Zenodo
创建时间:
2025-12-16
二维码
社区交流群
二维码
科研交流群
商业服务