Robust 4C-seq data analysis to screen for regulatory DNA interactions

ChEBI2012-09-04 更新2026-07-21 收录

染色质构象

基因调控网络

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-40420 数据链接链接失效反馈

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资源简介：

Robust 4C-seq data analysis to screen for regulatory DNA interactions

创建时间：

2012-09-04

RSK1-driven TRIM28-E2F1 feedback loop promotes castration-resistant prostate cancer progression

前列腺癌分子机制

基因调控网络

Castration-resistant prostate cancer (CRPC) marks the advanced and lethal stage of prostate cancer (PCa). TRIM28, also known as KAP1, is a transcriptional regulator recently shown to promote CRPC cell

NIAID Data Ecosystem40

Statistical properties of the gold standard networks in the in silico network inference challenge.

网络推断

基因调控网络

In each of the three sub-challenges the number of nodes was held constant but the number of edges and regulator nodes was not. There were five gold standard networks in each of the three sub-challenge

NIAID Data Ecosystem10

Mapping the global chromatin connectivity network in colorectal cancer cell HCT116 and Oxaliplatin-resistant cell HCT116OxR [ChIP-seq]

化疗耐药机制

染色质构象

Numerous studies have highlighted the critical role of genetic and epigenetic modifications in the regulation of oxaliplatin resistance, but whether changes involving chromatin structure have not been

NIAID Data Ecosystem00

Enriched clusters in regulatory networks.

基因调控网络

转录因子基序

Functional annotation clustering of genes with a H3K27ac differently enriched promoter connected to transcription factors with motifs overrepresented in soleus and EDL myonuclei, respectively. Cluster

Figshare2021-11-09 更新10

GO:0043392 (negative regulation of DNA binding)

DNA结合负调控

基因调控网络

This network was assembled automatically by INDRA (http://indra.bio) by processing all available biomedical literature with multiple machine reading systems, and integrating curated pathway databases.

NIAID Data Ecosystem00

Robust 4C-seq data analysis to screen for regulatory DNA interactions

资源简介：

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