遇见数据集

Firmicutes_Clostridia.zip

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NIAID Data Ecosystem2026-03-12 收录
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GeneHunt based identification of Glycoside Hydrolases in (completely) sequenced bacterial genomes - retrieved from PATRIC.brc. Ref for GeneHunt: https://www.nature.com/articles/s41598-019-46290-w. File types: SEQ_strain.txt : Fasta formated AA sequence of identified GH in "strain" STAT_stain.txt: Stat for all the Prot. Domain in GHs identified in "strain" G0_strain.pdf: graphical representation of the GHs in the sequenced chromosome of "strain" G1_strain.pdf: graphical representation of all the GHs in the sequenced chromosome of "strain"

本数据集依托GeneHunt工具,对完成全基因组测序的细菌基因组中的糖苷水解酶(Glycoside Hydrolases)开展鉴定工作,相关数据从PATRIC.brc数据库获取。GeneHunt的参考文献链接:https://www.nature.com/articles/s41598-019-46290-w。数据集包含以下类型文件: - SEQ_strain.txt:目标菌株中已鉴定糖苷水解酶的FASTA格式氨基酸序列文件 - STAT_strain.txt:该菌株中已鉴定的全部糖苷水解酶的蛋白质结构域统计文件 - G0_strain.pdf:该菌株测序染色体上糖苷水解酶的可视化图谱 - G1_strain.pdf:该菌株测序染色体上全部糖苷水解酶的可视化图谱

创建时间:
2020-10-02
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