Northern sea otter genotypes

These vcf files contain filtered genotypes from the northern sea otter (Enhydra lutris kenyoni) sequencing reads (SRA: SRX2967283, from Jones et al. (2018)) mapped to the domestic ferret reference genome (GCF_000215625.1). When gVCF files were generated, the genome was split into 323 chunks to parallelize processing and reduce filesize. Each of the first 1-224 .vcf files each contain a single scaffold, and the remaining 225-323 .vcf files each contain groups of 76 smaller scaffolds. The directory ferret_genome_interval_bedfiles.tar.gz contains the bed files that give the scaffold coordinates of each .vcf file (e.g. interval_244.bed gives the coordinates of the scaffolds contained in the vcf file labeled as 244: *.raw_variants.244.*.HQsites.Only.rmDotGenotypes.rmBadVars.vcf.gz).