CAGE_peaks_expression (hg38 v3)
收藏Mendeley Data2024-06-27 更新2024-06-27 收录
下载链接：
https://figshare.com/articles/dataset/Re-processing_of_the_data_generated_by_the_FANTOM5_project_hg38_v3_CAGE_peaks_expression/4880081/4
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资源简介：
This folder contains CAGE peaks expression tables for the robust set of peaks. hg38.fair+new_CAGE_peaks_phase1and2_ann.txt.gz - CAGE peak based table with annotated peaks for mouse samples (fairly remapped) hg38.fair+new_CAGE_peaks_phase1and2_liftover_ann.txt.gz - CAGE peak based table with annotated peaks for mouse samples (all liftover) hg38.fair+new_CAGE_peaks_phase1and2_tpm.osc.txt.gz - CAGE peak based expression table (RLE normalized) for mouse samples [see edgeR documentation for further details about normalization method] hg38.fair+new_CAGE_peaks_phase1and2_counts.osc.txt.gz - CAGE peak based expression table for mouse samples hg38.fair+new_CAGE_peaks_phase1and2_tpm_ann.osc.txt.gz - CAGE peak based expression table (RLE normalized) for mouse with annotation hg38.fair+new_CAGE_peaks_phase1and2_counts_ann.osc.txt.gz - CAGE peak based expression table for mouse with annotation
本文件夹收录了针对稳健峰集的CAGE（Cap Analysis of Gene Expression，基因表达连续分析）峰表达量表。
hg38.fair+new_CAGE_peaks_phase1and2_ann.txt.gz - 基于CAGE峰的表格，包含经合理重映射的小鼠样本注释峰
hg38.fair+new_CAGE_peaks_phase1and2_liftover_ann.txt.gz - 基于CAGE峰的表格，包含经全重映射的小鼠样本注释峰
hg38.fair+new_CAGE_peaks_phase1and2_tpm.osc.txt.gz - 针对小鼠样本的基于CAGE峰的表达量表（经RLE（Relative Log Expression，相对对数表达）归一化）[有关该归一化方法的详细信息，请参阅edgeR官方文档]
hg38.fair+new_CAGE_peaks_phase1and2_counts.osc.txt.gz - 针对小鼠样本的基于CAGE峰的表达量表
hg38.fair+new_CAGE_peaks_phase1and2_tpm_ann.osc.txt.gz - 带注释信息的经RLE归一化的小鼠样本基于CAGE峰的表达量表
hg38.fair+new_CAGE_peaks_phase1and2_counts_ann.osc.txt.gz - 带注释信息的小鼠样本基于CAGE峰的表达量表
创建时间：
2023-06-28
