Hirshfeld Surfaces Identify Inadequacies in Computations of Intermolecular Interactions in Crystals: Pentamorphic 1,8-Dihydroxyanthraquinone
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https://figshare.com/articles/dataset/Hirshfeld_Surfaces_Identify_Inadequacies_in_Computations_of_Intermolecular_Interactions_in_Crystals_Pentamorphic_1_8_Dihydroxyanthraquinone/2895406
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Fingerprint plots of Hirshfeld surfaces were used to locate and analyze the deficiencies in various methodologies employed in the determination of the relative energies of five polymorphs of 1,8-dihydroxyanthraquinone. Nine crystallographically independent molecules were characterized by X-ray crystallography and Hirshfeld surfaces were derived from the X-ray structures. The space groups and number of independent molecules (Z′) for each of the polymorphs (1−5) is as follows: (1) P41 (or P43),Z′ = 1; (2) Pca21, Z′ = 2; (3) P1̅, Z′ = 4; (4) P21/n, Z′ = 1; (5) P41212 (or P43212), Z′ = 0.5. Form 1 is the most thermodynamically stable among the reproducible structures, as established by competitive solubility tests, followed by 2 and then 4. The unrestrained structures of the five polymorphs were computed using the CVFF and COMPASS force fields as well as with the density functional code, SIESTA.
本研究借助赫希菲尔德表面(Hirshfeld surfaces)指纹图,定位并分析了用于测定1,8-二羟基蒽醌五种多晶型物相对能量的多种方法存在的缺陷。研究通过X射线晶体学(X-ray crystallography)表征了9个晶体学独立分子,并从X射线衍射结构中导出了赫希菲尔德表面。五种多晶型物(编号1至5)对应的空间群与独立分子数(Z′)如下:(1) P4₁(或P4₃),Z′=1;(2) Pca2₁,Z′=2;(3) Poverline{1},Z′=4;(4) P2₁/n,Z′=1;(5) P4₁2₁2(或P4₃2₁2),Z′=0.5。经竞争溶解度实验验证,在可重现的晶体结构中,1号多晶型物的热力学稳定性最高,其次为2号与4号。本研究采用CVFF力场、COMPASS力场以及密度泛函代码SIESTA,对五种多晶型物的无约束结构进行了计算。
创建时间:
2016-02-27



