Genome assembly of the sea turtle Caretta caretta
收藏DataCite Commons2025-08-15 更新2026-05-03 收录
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http://gigadb.org/dataset/102742
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<i>Caretta caretta</i> is found in nearly all the world's temperate and tropical oceans: the Atlantic Ocean from Newfoundland to Argentina, the Indian Ocean from southern Africa to the Arabian Gulf to western Australia, the Mediterranean Sea, and the Pacific Ocean from Alaska to Chile and Australia to Japan. During winter months loggerhead sea turtles migrate to tropical and subtropical waters.<br>In this study we report the genomic sizes for haplotype-separated chromosome-scale assemblies for <i>C. caretta</i> are ~2.2 Gb, with contig N50 ~1.2 Gb. The annotated genes are 24,378 and 26,027 for Haploype 1 and Haplotype 2, respectively.
蠵龟(Caretta caretta)几乎遍布全球所有温带与热带海域:涵盖从纽芬兰延伸至阿根廷的大西洋海域、从南非经阿拉伯海湾至西澳大利亚的印度洋海域、地中海海域,以及从阿拉斯加延伸至智利、从澳大利亚延伸至日本的太平洋海域。冬季期间,蠵龟会洄游至热带与亚热带水域。
本研究报道了蠵龟的单倍型分离染色体级基因组组装的基因组大小约为2.2 Gb,其重叠群N50(contig N50)约为1.2 Gb。单倍型1与单倍型2的注释基因数量分别为24378和26027。
提供机构:
GigaScience Database
创建时间:
2025-08-15



