Phylogenetic reconstructions of 94 Micromonas commoda RCC299 tRNA modification enzymes

Phylogenetic reconstructions of 94<em> Micromonas commoda</em> RCC299 tRNA modification enzymes in nexus (*.tre) and pdf format (*.pdf), corresponding to Fig. 2 and Dataset S2 in the manuscript. Trees were inferred using IQ-TREE, using the best LG model identified for each alignment separately, node support was calculated using 1000 ultrafast bootstrap replicates. Filenames for phylogenies contain, in that order, the <em>Micromonas commoda</em> RCC299 protein ID(s), the name of the gene(s) as described in the manuscript and the model used for tree reconstruction.本数据集包含94种模式小单胞藻（Micromonas commoda）RCC299的tRNA修饰酶的系统发育重建结果，以NEXUS格式（*.tre）与PDF格式（*.pdf）存储，对应手稿中的图2与补充数据集S2。系统发育树通过IQ-TREE软件构建，针对每一组序列联配分别筛选最优LG替换模型，节点支持度通过1000次超快速自展重复抽样计算得到。系统发育树的文件名依次包含以下内容：模式小单胞藻RCC299的蛋白质ID、手稿中记载的对应基因名称，以及用于构建该系统发育树的替换模型。