Biological and Simulated datasets for testing the SCAMPP framework for phylogenetic placement methods

Thank you for using these datasets! These files contain trees and reference alignments, as well as the selected query sequences for testing phylogenetic placement methods against and within the SCAMPP framework. There are four datasets from three different sources, each containing their source alignment and "true" tree, any estimated trees that may have been generated, and any re-estimated branch lengths that were created to be used with their requisite phylogenetic placement method. Three biological datasets (16S.B.ALL, PEWO/LTP_s128_SSU, and PEWO/green85) and one simulated dataset (nt78) is contained. See README.txt in each file for more information.

感谢您使用本数据集！本批次文件包含系统发育树、参考比对序列，以及用于在SCAMPP框架内及针对该框架测试系统发育放置方法的精选查询序列。本数据集包含来自3个不同来源的4个数据集，每个数据集均包含其源比对文件与「真实」系统发育树、所有可能生成的估计系统发育树，以及为配合其对应系统发育放置方法而构建的重新估计分支长度参数。本数据集包含3个生物学数据集（16S.B.ALL、PEWO/LTP_s128_SSU及PEWO/green85）与1个模拟数据集（nt78）。详细信息请参阅各文件中的README.txt文档。