Additional file 1 of Analysis and comprehensive comparison of PacBio and nanopore-based RNA sequencing of the Arabidopsis transcriptome

Additional file 1: Table S1. Summary of clean data produced by Illumina sequencing of three repetitions. Table S2. Illumina reads mapped to the reference genome. Table S3. PacBio sequencing results. Table S4. Nanopore sequencing results. Table S5. Characteristics of PacBio and ONT Pc identified specific known genes. Table S6. Common AS events between PacBio and ONT Pc data. Table S7. SSR identification of PacBio and ONT data. Table S8. Common lncRNAs between PacBio and ONT Pc data. Table S9. Transcript expression levels of Illumina data. Table S10. Transcript expression levels of ONT Dc data. Table S11. Transcript expression levels of ONT Pc data. Table S12. Primer sequences for PCR validation.附加文件1：表S1。三次重复Illumina测序所得洁净数据汇总。表S2：比对至参考基因组的Illumina测序读段（reads）。表S3：PacBio测序结果。表S4：纳米孔测序（Nanopore）结果。表S5：PacBio与ONT Pc测序鉴定得到的特异性已知基因的特征信息。表S6：PacBio与ONT Pc数据中共有的可变剪接（Alternative Splicing, AS）事件。表S7：PacBio与ONT数据的简单序列重复（Simple Sequence Repeat, SSR）鉴定结果。表S8：PacBio与ONT Pc数据中共有的长链非编码RNA（long non-coding RNAs, lncRNAs）。表S9：Illumina测序数据的转录本表达水平。表S10：ONT Dc数据的转录本表达水平。表S11：ONT Pc数据的转录本表达水平。表S12：用于聚合酶链式反应（Polymerase Chain Reaction, PCR）验证的引物序列。