Additional file 5: Table S1. of Cell fixation and preservation for droplet-based single-cell transcriptomics
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Top 50 marker genes expressed in 4873 fixed, primary cells from Drosophila embryos. Related to Fig. 3. Tables S1 and S2 contain the top 50 marker genes per cluster, provided by Seurat's function 'FindAllMarkers' [17]. We additionally ordered them per cluster in decreasing log2-fold change (log2FC). The log2FC was computed for a given gene by dividing its average normalized expression for a given cluster over the average normalized expression in the rest of the clusters and taking the logarithm of the fold change. (XLSX 214 kb)
果蝇胚胎4873个固定原代细胞中表达的前50个标记基因(marker gene),与图3相关。附表S1与S2收录了每个聚类的前50个标记基因,这些结果由Seurat工具的'FindAllMarkers'函数生成[17]。我们额外按照每个聚类的对数2倍变化(log2-fold change, log2FC)从高到低对其进行了排序。对于特定基因,log2FC的计算方式为:将该基因在对应聚类中的平均归一化表达量,除以其在其余所有聚类中的平均归一化表达量,再对该倍数变化取对数。(XLSX格式,文件大小214 KB)
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Figshare
创建时间:
2017-05-20



