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Additional file 2 of Longitudinal DNA methylation dynamics as a practical indicator in clinical epigenetics

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Additional file 2: Tables. S1–S7. Table S1. Characteristics of the two study participants. Table S2. Numbers of CpGs of each category in each sample. Table S3. Enriched gene-ontology terms (biological process) among genes with stable or dynamic CpGs. Enrichment analyses were performed for each of the four samples. FDR-corrected p-values are presented. NE: not enriched. Table S4. Enriched gene-ontology terms (cellular component) among genes with stable or dynamic CpGs. Enrichment analyses were performed for each of the four samples. FDR-corrected p-values are presented. NE: not enriched. Table S5. Enriched gene-ontology terms (molecular function) among genes with stable or dynamic CpGs. Enrichment analyses were performed for each of the four samples. FDR-corrected p-values are presented. NE: not enriched. Table S6. Enriched Kyoto Encyclopedia of Genes and Genomes pathways among genes with stable or dynamic CpGs. Enrichment analyses were performed for each of the four samples. FDR-corrected p-values are presented. NE: not enriched. Table S7. Gene ontology-terms for ISM1 and GPR37. Data obtained from QuickGO

附加文件2:表格。S1–S7。 表S1:两名研究受试者的特征。 表S2:各样本中各类CpG的数量。 表S3:携带稳定或动态CpG的基因所富集的基因本体(Gene Ontology, GO)术语(生物过程)。针对全部4个样本分别开展富集分析,结果展示经错误发现率(False Discovery Rate, FDR)校正后的P值。NE:未富集。 表S4:携带稳定或动态CpG的基因所富集的基因本体术语(细胞组分)。针对全部4个样本分别开展富集分析,结果展示经FDR校正后的P值。NE:未富集。 表S5:携带稳定或动态CpG的基因所富集的基因本体术语(分子功能)。针对全部4个样本分别开展富集分析,结果展示经FDR校正后的P值。NE:未富集。 表S6:携带稳定或动态CpG的基因所富集的京都基因与基因组百科全书(Kyoto Encyclopedia of Genes and Genomes, KEGG)通路。针对全部4个样本分别开展富集分析,结果展示经FDR校正后的P值。NE:未富集。 表S7:ISM1与GPR37的基因本体术语。数据来源于QuickGO
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2021-12-14
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