Accuracy of 3% OTUs constructed from denoised pyrosequences from the three multi-sample artificial community datasets retained by APDP and three alternative denoising approaches.
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The number of false positives (FP) and false negatives (FN) is shown for cases where miscalled and near-match OTUs are considered to be incorrect (TP only) or correct (TP+NM). In addition, the results are shown for each method after excluding OTUs with fewer reads than the minimum detection threshold of APDP (cutoff).
本结果展示了两种判定场景下的假阳性(false positives,FP)与假阴性(false negatives,FN)数量:当错判的(miscalled)与近匹配的(near-match)操作分类单元(Operational Taxonomic Unit,OTU)被认定为错误时(此时仅将真阳性(true positive,TP)计为正确),以及当它们被认定为正确时(此时将真阳性(TP)与近匹配(near-match,NM)均计为正确)。此外,本结果还展示了剔除读数量低于APDP最低检测阈值(截断值cutoff)的OTU后,各分析方法的对应结果。
创建时间:
2015-12-02




