Angus Sequence Data: Animal Dark_Knight
收藏NIAID Data Ecosystem2026-04-29 收录
下载链接:
https://figshare.com/articles/dataset/Angus_Sequence_Data_Animal_Dark_Knight/24666027
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资源简介:
Whole genome sequence data for Bovidae Bos taurus - beef Angus. The data is in "fastq" format.
The National Animal Germplasm Program does not have germplasm for this animal.
There are two versions of each file because we did paired end sequencing. There are two reads for each of the 210 data lines (a forward and a reverse read) summing to 420 total. A diagram of this is provided in the Collection Dataset. In the diagram, the two reads would correspond to read 1 and read 3.
Resources in this dataset:
tar file containing 14 files. The files are:
RAPiD-Genomics_F112_CSU_136201_P001_WA01_i5-515_i7-97_S1_L003_R1_001.fastq.gzRAPiD-Genomics_F112_CSU_136201_P001_WA01_i5-515_i7-97_S1_L003_R2_001.fastq.gzRAPiD-Genomics-F113-CSU-136201-P001-WA01-i5-515-i7-97_S137_L002_R1_001.fastq.gzRAPiD-Genomics-F113-CSU-136201-P001-WA01-i5-515-i7-97_S137_L002_R2_001.fastq.gzRAPiD-Genomics-F113-CSU-136201-P001-WA01-i5-515-i7-97_S1_L001_R1_001.fastq.gzRAPiD-Genomics-F113-CSU-136201-P001-WA01-i5-515-i7-97_S1_L001_R2_001.fastq.gzRAPiD-Genomics-F114-CSU-136201-P001-WA01-i5-515-i7-97_S1_L003_R1_001.fastq.gzRAPiD-Genomics-F114-CSU-136201-P001-WA01-i5-515-i7-97_S1_L003_R2_001.fastq.gzRAPiD-Genomics_F115_CSU_136201_P001_WA01_i5-515_i7-97_S1_L001_R1_001.fastq.gzRAPiD-Genomics_F115_CSU_136201_P001_WA01_i5-515_i7-97_S1_L001_R2_001.fastq.gzRAPiD-Genomics_F115_CSU_136201_P001_WA01_i5-515_i7-97_S1_L002_R1_001.fastq.gzRAPiD-Genomics_F115_CSU_136201_P001_WA01_i5-515_i7-97_S1_L002_R2_001.fastq.gzRAPiD-Genomics_F116_CSU_136201_P001_WA01_i5-515_i7-97_S356_L002_R1_001.fastq.gzRAPiD-Genomics_F116_CSU_136201_P001_WA01_i5-515_i7-97_S356_L002_R2_001.fastq.gz
本数据集为牛科(Bovidae)安格斯肉牛(Bos taurus)的全基因组测序数据,数据存储格式为fastq。
国家动物种质资源计划(National Animal Germplasm Program)暂未收录该物种的种质资源。
由于采用双端测序策略,每份测序文件均存在两个对应版本;本数据集包含210组数据,每组数据对应正向与反向两条读段,总计420条读段。相关示意图已收录于采集数据集(Collection Dataset)中,图中两条读段分别对应读段1与读段3。
本数据集包含的资源为一个内含14个文件的tar压缩包,具体文件列表如下:
RAPiD-Genomics_F112_CSU_136201_P001_WA01_i5-515_i7-97_S1_L003_R1_001.fastq.gz、RAPiD-Genomics_F112_CSU_136201_P001_WA01_i5-515_i7-97_S1_L003_R2_001.fastq.gz、RAPiD-Genomics-F113-CSU-136201-P001-WA01-i5-515-i7-97_S137_L002_R1_001.fastq.gz、RAPiD-Genomics-F113-CSU-136201-P001-WA01-i5-515-i7-97_S137_L002_R2_001.fastq.gz、RAPiD-Genomics-F113-CSU-136201-P001-WA01-i5-515-i7-97_S1_L001_R1_001.fastq.gz、RAPiD-Genomics-F113-CSU-136201-P001-WA01-i5-515-i7-97_S1_L001_R2_001.fastq.gz、RAPiD-Genomics-F114-CSU-136201-P001-WA01-i5-515-i7-97_S1_L003_R1_001.fastq.gz、RAPiD-Genomics-F114-CSU-136201-P001-WA01-i5-515-i7-97_S1_L003_R2_001.fastq.gz、RAPiD-Genomics_F115_CSU_136201_P001_WA01_i5-515_i7-97_S1_L001_R1_001.fastq.gz、RAPiD-Genomics_F115_CSU_136201_P001_WA01_i5-515_i7-97_S1_L001_R2_001.fastq.gz、RAPiD-Genomics_F115_CSU_136201_P001_WA01_i5-515_i7-97_S1_L002_R1_001.fastq.gz、RAPiD-Genomics_F115_CSU_136201_P001_WA01_i5-515_i7-97_S1_L002_R2_001.fastq.gz、RAPiD-Genomics_F116_CSU_136201_P001_WA01_i5-515_i7-97_S356_L002_R1_001.fastq.gz、RAPiD-Genomics_F116_CSU_136201_P001_WA01_i5-515_i7-97_S356_L002_R2_001.fastq.gz
创建时间:
2021-02-23



