Highly differentiated SNPs where Wewak C580Y mutants and Papua Indonesia parasites carry the same allele.
收藏Figshare2020-12-15 更新2026-04-28 收录
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https://figshare.com/articles/dataset/Highly_differentiated_SNPs_where_Wewak_C580Y_mutants_and_Papua_Indonesia_parasites_carry_the_same_allele_/13382367
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Each row shows a non-synonymous SNP that is highly differentiated between the Wewak (PNG) and Timika (Indonesia) populations (FST ≥ 0.3) at which the Wewak C580Y mutants carry the allele that is most prevalent in Timika. The columns show: the chromosome number and nucleotide position of the SNP; the name and ID of the gene containing the SNP (genes associated with drug resistance are shown on a coloured background); the mutation name, showing amino acid change and position; the frequency of the mutant allele, in Wewak and in Timika (background colour intensity is proportional to the value); the FST between the two populations; the proportion of sample pairs that are in IBD with Wewak C580 samples at that position, in Wewak and Timika (background colour intensity is proportional to the value); and the Pubmed PMID reference of literature that implicates the gene in drug resistance, if applicable. (XLSX)
创建时间:
2020-12-15



