File S1 - Comparative Analysis of Carbohydrate Active Enzymes in <i>Clostridium termitidis</i> CT1112 Reveals Complex Carbohydrate Degradation Ability

Table S1) Comparative analysis of the number of glycoside hydrolase (GH) families in selected Clostridium species. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium specie. The number of family members is colored with respect to the average number of members found in the 6 genomes. Color code: black = deviation between –2and 2 standard deviation (SD) with respect to average; light orange = deviation >2 SD above mean; lightgreen = deviation <–2 SD below mean; dark orange = >3 SD above mean; lightblue = deviation <–3 SD below mean; red = >4 SD above mean; blue = deviation <–4 SD below mean; dark red = >5 SD above mean; darkblue = deviation <–5 SD below mean. Table S2) Comparative analysis of the number of glycosyl transferases (GT) families in selected Clostridium species. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium species. The number of family members is colored with respect to the average number of members found in the 6 genomes. Color code: black = deviation between –2and 2 standard deviation (SD) with respect to average; light orange = deviation >2 SD above mean; lightgreen = deviation <–2 SD below mean; dark orange = >3 SD above mean; lightblue = deviation <–3 SD below mean; red = >4 SD above mean; blue = deviation <–4 SD below mean; dark red = >5 SD above mean; darkblue = deviation <–5 SD below mean. Table S3) Comparative analysis of the number of polysaccharide lyase (PL) families in selected Clostridium species. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium specie. The number of family members is colored with respect to the average number of members found in the 6 genomes. Color code: black = deviation between –2and 2 standard deviation (SD) with respect to average; light orange = deviation >2 SD above mean; lightgreen = deviation <–2 SD below mean; dark orange = >3 SD above mean; lightblue = deviation <–3 SD below mean; red = >4 SD above mean; blue = deviation <–4 SD below mean; dark red = >5 SD above mean; darkblue = deviation <–5 SD below mean. Table S4) Comparative analysis of the number of carbohydrate esterase (CE) families in selected Clostridium species. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium specie. The number of family members is colored with respect to the average number of members found in the 6 genomes. Color code: black = deviation between –2and 2 standard deviation (SD) with respect to average; light orange = deviation >2 SD above mean; lightgreen = deviation <–2 SD below mean; dark orange = >3 SD above mean; lightblue = deviation <–3 SD below mean; red = >4 SD above mean; blue = deviation <–4 SD below mean; dark red = >5 SD above mean; darkblue = deviation <–5 SD below mean. Table S5) Comparative analysis of the number of carbohydrate binding module (CBM) families in selected Clostridium spp. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium specie. The number of family members is colored with respect to the average number of members found in the 6 genomes. Color code: black = deviation between –2and 2 standard deviation (SD) with respect to average; light orange = deviation >2 SD above mean; lightgreen = deviation <–2 SD below mean; dark orange = >3 SD above mean; lightblue = deviation <–3 SD below mean; red = >4 SD above mean; blue = deviation <–4 SD below mean; dark red = >5 SD above mean; darkblue = deviation <–5 SD below mean. Table S6) Comparative analysis of predicted extracellular CAZymes, designated in the CAZy database, involved with lignocellulosic biomass hydrolysis within Clostridium species. Numbers below each family class indicate the number of members belonging to the specific family for the specific Clostridium specie. (XLSX)附表S1：选定梭菌属（Clostridium）物种中糖苷水解酶（glycoside hydrolase, GH）家族数量的比较分析。各家族分类下的数值，代表对应梭菌物种所属该特定家族的成员数量。家族成员数量的配色依据6个基因组中的平均成员数设定，配色规则如下：黑色表示偏差处于平均值±2倍标准差（standard deviation, SD）范围内；浅橙色表示偏差高于平均值2SD以上；淡绿色表示偏差低于平均值-2SD以下；深橙色表示偏差高于平均值3SD以上；浅蓝色表示偏差低于平均值-3SD以下；红色表示偏差高于平均值4SD以上；蓝色表示偏差低于平均值-4SD以下；深红色表示偏差高于平均值5SD以上；深蓝色表示偏差低于平均值-5SD以下。 附表S2：选定梭菌属物种中糖基转移酶（glycosyl transferases, GT）家族数量的比较分析。各家族分类下的数值，代表对应梭菌物种所属该特定家族的成员数量。家族成员数量的配色依据6个基因组中的平均成员数设定，配色规则如下：黑色表示偏差处于平均值±2倍标准差（standard deviation, SD）范围内；浅橙色表示偏差高于平均值2SD以上；淡绿色表示偏差低于平均值-2SD以下；深橙色表示偏差高于平均值3SD以上；浅蓝色表示偏差低于平均值-3SD以下；红色表示偏差高于平均值4SD以上；蓝色表示偏差低于平均值-4SD以下；深红色表示偏差高于平均值5SD以上；深蓝色表示偏差低于平均值-5SD以下。 附表S3：选定梭菌属物种中多糖裂解酶（polysaccharide lyase, PL）家族数量的比较分析。各家族分类下的数值，代表对应梭菌物种所属该特定家族的成员数量。家族成员数量的配色依据6个基因组中的平均成员数设定，配色规则如下：黑色表示偏差处于平均值±2倍标准差（standard deviation, SD）范围内；浅橙色表示偏差高于平均值2SD以上；淡绿色表示偏差低于平均值-2SD以下；深橙色表示偏差高于平均值3SD以上；浅蓝色表示偏差低于平均值-3SD以下；红色表示偏差高于平均值4SD以上；蓝色表示偏差低于平均值-4SD以下；深红色表示偏差高于平均值5SD以上；深蓝色表示偏差低于平均值-5SD以下。 附表S4：选定梭菌属物种中碳水化合物酯酶（carbohydrate esterase, CE）家族数量的比较分析。各家族分类下的数值，代表对应梭菌物种所属该特定家族的成员数量。家族成员数量的配色依据6个基因组中的平均成员数设定，配色规则如下：黑色表示偏差处于平均值±2倍标准差（standard deviation, SD）范围内；浅橙色表示偏差高于平均值2SD以上；淡绿色表示偏差低于平均值-2SD以下；深橙色表示偏差高于平均值3SD以上；浅蓝色表示偏差低于平均值-3SD以下；红色表示偏差高于平均值4SD以上；蓝色表示偏差低于平均值-4SD以下；深红色表示偏差高于平均值5SD以上；深蓝色表示偏差低于平均值-5SD以下。 附表S5：选定梭菌属物种中碳水化合物结合模块（carbohydrate binding module, CBM）家族数量的比较分析。各家族分类下的数值，代表对应梭菌物种所属该特定家族的成员数量。家族成员数量的配色依据6个基因组中的平均成员数设定，配色规则如下：黑色表示偏差处于平均值±2倍标准差（standard deviation, SD）范围内；浅橙色表示偏差高于平均值2SD以上；淡绿色表示偏差低于平均值-2SD以下；深橙色表示偏差高于平均值3SD以上；浅蓝色表示偏差低于平均值-3SD以下；红色表示偏差高于平均值4SD以上；蓝色表示偏差低于平均值-4SD以下；深红色表示偏差高于平均值5SD以上；深蓝色表示偏差低于平均值-5SD以下。 附表S6：梭菌属物种中参与木质纤维素生物质水解的、经碳水化合物活性酶（Carbohydrate-Active enZYmes, CAZy）数据库注释的预测分泌型碳水化合物活性酶（CAZymes）的比较分析。各家族分类下的数值，代表对应梭菌物种所属该特定家族的成员数量。（XLSX格式）