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Competitive gene-set p-values for MAGMA and INRICH significant gene-sets.

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https://figshare.com/articles/dataset/_Competitive_gene_set_p_values_for_MAGMA_and_INRICH_significant_gene_sets_/1383780
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Significant p-values are highlighted in bold. MAGMA p-values compared against a Bonferroni-corrected threshold of 0.05/1320 = 0.000038. For INRICH, corrected p-values (not shown) are compared against a threshold of 0.05; corrected p-value for all three significant gene-sets is 0.049. a p-values were not computed because fewer than two genes in the set overlapped with an associated interval; p-values are therefore effectively equal to 1 Competitive gene-set p-values for MAGMA and INRICH significant gene-sets.

具有统计学显著性的p值以粗体标注。 MAGMA检验所得的p值需与邦费罗尼校正阈值0.05/1320 = 0.000038进行比较。 对于INRICH检验,校正后p值(未展示)需与阈值0.05进行比较;全部3个显著基因集的校正后p值均为0.049。 当基因集中与关联区间重叠的基因数少于2个时,无法计算p值,此时p值实际等价于1。 本部分为MAGMA与INRICH检验中显著基因集的竞争性基因集p值。
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2015-04-17
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