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Additional file 17: of Contribution of trans regulatory eQTL to cryptic genetic variation in C. elegans

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https://springernature.figshare.com/articles/dataset/Additional_file_17_of_Contribution_of_trans_regulatory_eQTL_to_cryptic_genetic_variation_in_C_elegans/5161996
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A list of the enrichment analysis of genes with an eQTL. Enrichment analysis on the genes with eQTL across different conditions. The sets were also analyzed for genes with an eQTL with a specific allelic effect, belonging to a specific trans-band and found, and belonging to a specific treatment. The allelic effects are indicated based on direction (e.g. cis-CB4856 means cis-eQTL higher expressed in CB4856). The database used for enrichment (Annotation) and the category (Group), and the number of genes on the array that are in the group (Genes_in_group) are indicated. Furthermore, the overlap with the cluster (Overlap) and the Bonferroni-corrected significance of that overlap are shown. (XLSX 24 kb)

本数据集为携带表达数量性状位点(expression Quantitative Trait Locus, eQTL)的基因的富集分析结果列表。针对不同实验条件下的eQTL携带基因开展了富集分析。同时,本数据集还针对三类eQTL携带基因开展了富集分析:具有特定等位基因效应的基因、属于特定反式区段(trans-band)且经检出的基因,以及接受特定处理的基因。等位基因效应依据表达方向进行标注(例如,cis-CB4856表示该顺式eQTL对应的基因在CB4856品系中表达量更高)。本次富集分析所使用的注释数据库(Annotation)、功能分类组别(Group),以及该分类组别在基因芯片上对应的基因总数(Genes_in_group)均已标注。此外,还展示了该分类组别与目标聚类的重叠基因数(Overlap),以及经Bonferroni多重检验校正后的该重叠结果的显著性水平。(文件格式:XLSX,文件大小:24 KB)
提供机构:
Figshare
创建时间:
2017-06-30
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