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Additional file 9: Table S21. of Transcriptional maturation of the mouse auditory forebrain

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Read counts for genes in all HUGO gene families. Normalized read counts for 19,826 genes in all HUGO gene families currently listed in that resource, listed alphabetically by gene family. Source: HUGO Gene Families database, HUGO Gene Nomenclature Committee at the European Bioinformatics Institute ( http://www.genenames.org ). Table S22. Gene set enrichment analysis of 111 HUGO gene families. Genesets are listed by functional group and family (from Table S21). For each geneset, the number of genes (Size), false discovery rate (FDR q-value), and direction of expression (up, down) are listed. Shading denotes gene families enriched above the 25Â % FDR cutoff. Table S23. Normalized read counts for genes in selected gene ontology (GO) categories from the MGI database. Genes are arranged alphabetically by GO category, along with gene symbols, names, and annotations. Source: Mouse Genome Informatics (MGI) Gene Ontology Browser, Jackson Laboratories ( www.informatics.jax.org ). Table S24. Gene set enrichment analysis of the 51 gene ontology categories. Genesets are listed by functional group and GO designation (from Table S23). For each geneset, the number of genes (Size), false discovery rate (FDR q-value), and direction of expression (up, down) are listed. Shading denotes categories enriched above 25Â % FDR cutoff.

所有人类基因组组织基因家族(HUGO Gene Families)的基因读段计数。本数据集包含当前收录于该数据库的全部19826个人类基因组组织基因家族基因的标准化读段计数,按基因家族字母顺序排序。数据来源:欧洲生物信息学研究所下属人类基因组命名委员会(HUGO Gene Nomenclature Committee)的人类基因组组织基因家族数据库(http://www.genenames.org)。表S22。 111个人类基因组组织基因家族的基因集富集分析结果。基因集按功能组及家族分类(源自表S21)。每个基因集均标注基因数量(Size)、错误发现率(FDR q值)以及表达方向(上调、下调)。着色标记出富集程度超过25% FDR阈值的基因家族。表S23。 小鼠基因组信息学(Mouse Genome Informatics, MGI)数据库中选定基因本体论(Gene Ontology, GO)分类下的基因标准化读段计数。数据集按GO分类字母顺序排列基因,同时附带基因符号、基因名称及注释信息。数据来源:杰克逊实验室(Jackson Laboratories)小鼠基因组信息学基因本体浏览器(www.informatics.jax.org)。表S24。 51个基因本体论分类的基因集富集分析结果。基因集按功能组及GO分类标识排序(源自表S23)。每个基因集均标注基因数量(Size)、错误发现率(FDR q值)以及表达方向(上调、下调)。着色标记出富集程度超过25% FDR阈值的分类。
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2017-12-19
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