Additional file 15: Table S9. of Xanthomonas adaptation to common bean is associated with horizontal transfers of genes encoding TAL effectors

Repeats found within all TAL effectors from X. citri pv. fuscans, X. phaseoli pv. phaseoli, X. citri pv. aurantifolii and X. phaseoli pv. manihotis strains. Sequences were compared after removal of RVD. Xcf = X. citri pv. fuscans; Xpp = X. phaseoli pv. phaseoli; Xca = X. citri pv. aurantifolii; Xpm = X. phaseoli pv. manihotis. A coloured line indicates that the repeat is shared between TAL effectors from different groups, one colour being associated with a single repeat and corresponding to the colour of repeats in Additional file 16: Figure S7. (XLSX 12 kb)本数据集聚焦来自柑橘黄单胞菌蔓茎变种（X. citri pv. fuscans）、菜豆黄单胞菌菜豆变种（X. phaseoli pv. phaseoli）、柑橘黄单胞菌柑橘变种（X. citri pv. aurantifolii）以及菜豆黄单胞菌木薯变种（X. phaseoli pv. manihotis）各菌株的全部转录激活样效应因子（Transcription Activator-Like effector, TAL effector）内部所发现的重复序列。所有序列在移除重复可变双残基（Repeat Variable Di-residue, RVD）后完成了比对分析。本研究所用缩写的对应关系如下：Xcf代表柑橘黄单胞菌蔓茎变种（X. citri pv. fuscans），Xpp代表菜豆黄单胞菌菜豆变种（X. phaseoli pv. phaseoli），Xca代表柑橘黄单胞菌柑橘变种（X. citri pv. aurantifolii），Xpm代表菜豆黄单胞菌木薯变种（X. phaseoli pv. manihotis）。带有颜色的线条表示该重复序列可在不同类群的转录激活样效应因子间共享，每种颜色仅对应一种重复序列，且与附加文件16的图S7中重复序列的配色保持一致。（文件格式：XLSX，大小：12 KB）