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RNAseq analysis of the N. punctiforme transcriptome during hormogonium development in wild type, and three sigma-factor deletion strains

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NIAID Data Ecosystem2026-05-26 收录
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Change in gene expression for wild-type Nostoc punctiforme ATCC 29133, or three derivative strains with sigma factors deleted, over the time course of hormogonium development Overall design: Total RNA from 3 biological replicates at 0,1,6,12, and 18 hours after hormogonium induction was ribodepleted, converted to cDNA, apended with adapters and sequenced in 6 lanes of a flow cell on an illumina HiSeq 4000 instrument

野生型点状念珠藻(Nostoc punctiforme)ATCC 29133,或三株敲除σ因子(sigma factors)的衍生菌株,在藻殖段(hormogonium)发育全过程中的基因表达变化。整体实验设计:在藻殖段诱导后的0、1、6、12及18小时,分别收集3份生物学重复的总RNA,经核糖体RNA去除处理后反转录为cDNA,添加接头序列后,在Illumina HiSeq 4000测序仪的单个流通池(flow cell)的6个泳道中完成测序。

创建时间:
2019-01-23
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