Genome-wide Brie CAD5 Surface PrPC - Differentiated PrPC High
收藏Mendeley Data2026-04-09 收录
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These are the raw .fastq files from NGS runs of the genome-wide CRISPR/Cas9 KO library (Brie) performed in differentiated CAD5 cells. They are labeled Brie_PrPC_High to indicate that these sgRNA sequences were captured in the "PrPC High" populations during FACS. Bioinformatic analysis was performed using the MAGeCK-VISPR and MAGeCKFlute pipelines using the biological replicates function to compare between "PrP Low" and "PrP High" samples.
本数据集包含在分化型CAD5细胞中开展的全基因组CRISPR/Cas9敲除文库(Brie文库)的下一代测序(Next-Generation Sequencing,NGS)原始.fastq格式文件。这些样本命名为Brie_PrPC_High,代表在荧光激活细胞分选(Fluorescence-Activated Cell Sorting,FACS)过程中,本数据集捕获的单向导RNA(single-guide RNA,sgRNA)序列来自"PrPC高表达"细胞群。后续采用MAGeCK-VISPR与MAGeCKFlute分析流程,并启用生物学重复功能,对"PrP低表达"与"PrP高表达"样本开展生物信息学分析。



