Effects of MBTD1 on gene expression
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https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE78024
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The NuA4/TIP60 acetyltransferase complex is a key regulator of genome expression and stability. Here, we identified MBTD1 as a new stable subunit of the complex and gleaned intriguing insights into TIP60’s function. Harboring a histone reader domain for H4K20me1/2, MBTD1 allows TIP60 to associate with specific gene promoters and to promote the repair of DNA double strand breaks by homologous recombination. Total RNA was analyzed on Illumina Human HT-12 V4.0 expression beadchip by McGill University and Genome Québec innovation Centre CRISPR/Cas9 technology was used to produce MBTD1 knockout cells in U2OS and to perform genome-wide expression analysis on three different clones compared to wild type cells.
NuA4/TIP60乙酰转移酶复合物(NuA4/TIP60 acetyltransferase complex)是调控基因组表达与稳定性的关键因子。本研究鉴定出MBTD1为该复合物的新型稳定亚基,并获得了关于TIP60功能的多项引人关注的新见解。MBTD1携带有识别H4K20me1/2的组蛋白阅读器结构域,可介导TIP60结合特定基因启动子,并促进同源重组通路修复DNA双链断裂(DNA double strand breaks)。实验方面,麦吉尔大学与魁北克基因组创新中心使用Illumina Human HT-12 V4.0表达微珠芯片(Illumina Human HT-12 V4.0 expression beadchip)完成了总RNA的表达分析;本研究同时采用CRISPR/Cas9技术(CRISPR/Cas9 technology)在U2OS细胞中构建MBTD1基因敲除细胞系,并针对3株独立敲除克隆与野生型细胞开展全基因组表达谱分析。
创建时间:
2020-03-06



