Additional information for Acidification from microbial oxidation of N, S, Fe and Mn as potential key mechanism for sprayed concrete deterioration in a subsea road tunnel

Here we include additional files for Karacic et al. Acidification from microbial oxidation of N, S, Fe and Mn as potential key mechanism for sprayed concrete deterioration in a subsea road tunnel Metagenome reads and MAGs are avaliable in the NCBI BioProject PRJNA755678 The following files are included here MAGs_summary_Oslofjord.tsv: Information about the Oslofjord MAGs (GTDB R207 taxonomy, relative abundance, Completness, Contamination, NCBI accessions) gtdbtk.ar53.summary. Output from GTDB-Tk v2.1.0 with GTDB R207_v2. Archaeal MAGs gtdbtk.bac120.summary.tsv. Output from GTDB-Tk v2.1.0 with GTDB R207_v2. Bacterial MAGs FeGenie-geneSummary.csv: Output from FeGenie Annotations_1.tsv : Output from DRAM (215 MAGs) Annotations_2.tsv: Output from DRAM (186 MAGs) OFTMs_DRAM_genes.DiSCo.filtered.txt. Output from DiSCo code_R.zip: R-code and additional files used for making MAGs figures This is version 2 of the dataset and it replaces version 1 (https://doi.org/10.5281/zenodo.5292093)本数据集收录Karacic等人相关研究的补充文件，其研究主题为：海底公路隧道内喷混凝土劣化的潜在关键机制——氮、硫、铁、锰的微生物氧化介导酸化作用。 宏基因组测序读段（Metagenome reads）与宏基因组组装基因组（Metagenome-Assembled Genomes, MAGs）已上传至NCBI生物项目库PRJNA755678。 本数据集包含以下文件： 1. MAGs_summary_Oslofjord.tsv：奥斯陆峡湾宏基因组组装基因组汇总文件，包含GTDB R207分类学注释、相对丰度、基因组完整性、污染率及NCBI登录号信息； 2. gtdbtk.ar53.summary：基于GTDB-Tk v2.1.0与GTDB R207_v2分析得到的古菌宏基因组组装基因组汇总结果； 3. gtdbtk.bac120.summary.tsv：基于GTDB-Tk v2.1.0与GTDB R207_v2分析得到的细菌宏基因组组装基因组汇总结果； 4. FeGenie-geneSummary.csv：FeGenie工具的分析输出结果； 5. Annotations_1.tsv：DRAM工具针对215个宏基因组组装基因组的注释输出结果； 6. Annotations_2.tsv：DRAM工具针对186个宏基因组组装基因组的注释输出结果； 7. OFTMs_DRAM_genes.DiSCo.filtered.txt：DiSCo工具的分析输出结果； 8. code_R.zip：用于绘制宏基因组组装基因组相关图表的R代码及配套补充文件。 本数据集为第2版，替代了第1版数据集（https://doi.org/10.5281/zenodo.5292093）。