Additional file 3: of Differential transcriptome analysis of enterohemorrhagic Escherichia coli strains reveals differences in response to plant-derived compounds

Table of the shared genome of E. coli O157:H− strain 3072/96, E. coli O104:H4 strain C227–11φcu, E. coli O157:H7 strain Sakai and E. coli strain K-12 substrain MG1655. For every homologous gene group (rows with unique identifier) the genes of the respective strains (columns) are listed. Names of homologous gene group are based on gene names of E. coli MG1655, if a respective homolog of this strain is present in the group. For homologous relationships between genes, a minimal nucleotide identity of 90% and length-coverage of 75% was assumed. The calculation of the shared genome was performed on the basis of a whole genome alignment of the four strains and a subsequent refinement by a RBH BLAST approach. (XLSX 476 kb)