RepeatMasker output tables of repetitive sequences for Neurospora species

RepeatMasker output tables (.out and .tbl) of repetitive sequences from high-quality genome assemblies of Neurospora strains, based on PacBio RSII long-read sequencing data, and from reference strains (2508, 2509, 2489). Strains are listed using the strain number from the Fungal Genetics Stock Center (www.fgsc.net) or from the D Jacobson's personal collection (W1426, W1434).<br><br>Strain list:<br><br>FGSC # | Species<br>-------+----------------------<br><br>2508 | Neurospora tetrasperma L6<br>2509 | Neurospora tetrasperma L6<br>10752 | Neurospora tetrasperma L9<br>9045 | Neurospora tetrasperma L7<br>9046 | Neurospora tetrasperma L7<br>2503 | Neurospora tetrasperma L8<br>2504 | Neurospora tetrasperma L8<br>8817 | Neurospora hispaniola<br>W1426 | Neurospora sitophila<br>W1434 | Neurospora sitophila<br>5940 | Neurospora sitophila<br>5941 | Neurospora sitophila<br>2489 | Neurospora crassa<br>8761 | Neurospora intermedia<br>8767 | Neurospora intermedia<br>8807 | Neurospora intermedia<br>10397 | Neurospora metzenbergii<br>8579 | Neurospora discreta<br><br>Reference: <br>Jacobson, D. J., et al. New findings of Neurospora in Europe and comparisons of diversity in temperate climates on continental scales. Mycologia 98, 550–559 (2006). <br><br>For further information on the strains and the genome assemblies, please see:<br>Nguyen et al., (2021) "Transposons and genome dynamics in the fungal genus Neurospora: insights from nearly gapless genome assemblies ", in preparation.<br>

本数据集包含基于PacBio RSII长读长测序数据获得的多株脉孢菌（Neurospora）高质量基因组组装中的重复序列注释工具 (RepeatMasker) 输出表格（文件格式为.out与.tbl），涉及的参考菌株为2508、2509、2489。菌株编号采用真菌遗传学保藏中心 (Fungal Genetics Stock Center，FGSC，www.fgsc.net) 或D Jacobson个人收藏库中的编号（W1426、W1434）。

菌株列表：

FGSC编号 | 物种
-------+----------------------
2508 | 四孢脉孢菌 (Neurospora tetrasperma) L6
2509 | 四孢脉孢菌 (Neurospora tetrasperma) L6
10752 | 四孢脉孢菌 (Neurospora tetrasperma) L9
9045 | 四孢脉孢菌 (Neurospora tetrasperma) L7
9046 | 四孢脉孢菌 (Neurospora tetrasperma) L7
2503 | 四孢脉孢菌 (Neurospora tetrasperma) L8
2504 | 四孢脉孢菌 (Neurospora tetrasperma) L8
8817 | 伊斯帕尼奥拉脉孢菌 (Neurospora hispaniola)
W1426 | 好食脉孢菌 (Neurospora sitophila)
W1434 | 好食脉孢菌 (Neurospora sitophila)
5940 | 好食脉孢菌 (Neurospora sitophila)
5941 | 好食脉孢菌 (Neurospora sitophila)
2489 | 粗糙脉孢菌 (Neurospora crassa)
8761 | 中间脉孢菌 (Neurospora intermedia)
8767 | 中间脉孢菌 (Neurospora intermedia)
8807 | 中间脉孢菌 (Neurospora intermedia)
10397 | 梅岑贝格脉孢菌 (Neurospora metzenbergii)
8579 | 离散脉孢菌 (Neurospora discreta)

参考文献：
Jacobson, D. J. 等. 欧洲脉孢菌的新发现及大陆尺度温带生境的多样性比较[J]. Mycologia, 2006, 98: 550–559.

如需了解菌株及基因组组装的更多信息，请参阅：
Nguyen等(2021) "Transposons and genome dynamics in the fungal genus Neurospora: insights from nearly gapless genome assemblies", 待发表。