遇见数据集

Supplementary Figure S1 - Bact71 concat Gammaproteobacteria

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Figshare2024-07-25 更新2026-04-08 收录
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Data files for the phylogeny in Supplementary Figure S1 of "Genetic potential for aerobic respiration and denitrification in globally distributed respiratory endosymbionts".<br><br>Files for a concatenated marker gene phylogeny of representatives of 305 gammaproteobacterial families. The genomes/mags included were obtained from the Genome Taxonomy Database (GTDB) and the genomic catalog of earth's microbiomes (GEM).<br><br>references:<br>GTDB:<br>https://academic.oup.com/nar/article/50/D1/D785/6370255 &amp; https://gtdb.ecogenomic.org/<br>GEM:<br>https://www.nature.com/articles/s41587-020-0718-6 &amp; https://genome.jgi.doe.gov/portal/GEMs/GEMs.home.html

《全球分布的呼吸内共生体的需氧呼吸与反硝化作用遗传潜力》一文补充图S1所涉系统发育分析数据文件。 305个γ-变形菌纲(Gammaproteobacteria)科代表物种的拼接标记基因系统发育分析所用文件。所纳入的基因组/宏基因组组装基因组(MAGs)源自基因组分类数据库(Genome Taxonomy Database, GTDB)与地球微生物组基因组目录(Genomic Catalog of Earth's Microbiomes, GEM)。 参考文献: 基因组分类数据库(GTDB): https://academic.oup.com/nar/article/50/D1/D785/6370255 及 https://gtdb.ecogenomic.org/ 地球微生物组基因组目录(GEM): https://www.nature.com/articles/s41587-020-0718-6 及 https://genome.jgi.doe.gov/portal/GEMs/GEMs.home.html

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Speth, Daan
创建时间:
2024-07-25
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