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Additional file 2: Table S4. of Genome-wide sequence variations between wild and cultivated tomato species revisited by whole genome sequence mapping

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Common high quality SNPs within each species of wild tomato. Table S5. Genes having species specific nucleotide variations in each of twelve wild tomato species. Table S7. List of genes with common Variations (SNPs and InDels) present in all wild but not present in any cultivated tomato. Table S8. List of genes with high Impact common wild variant alleles. Table S9. Variations (present in all wild but absent in all cultivated tomato) and positions of variations in R genes with gene coordinates and gene annotation. Table S10. List of genes with less than Tajima’s D value −3. (XLS 482 kb)

本数据集包含各野生番茄物种内的常见高质量单核苷酸多态性(Single Nucleotide Polymorphism, SNP)。 表S5:12个野生番茄物种中各物种携带特异性核苷酸变异的基因列表。 表S7:所有野生番茄均携带、所有栽培番茄均不含的共有变异(单核苷酸多态性(Single Nucleotide Polymorphism, SNP)与插入缺失(Insertion-Deletion, InDel))相关基因列表。 表S8:携带高影响性野生共有变异等位基因的基因列表。 表S9:所有野生番茄均存在、所有栽培番茄均缺失的变异及其在抗病基因(Resistance gene, R gene)中的位置信息,包含基因坐标与基因注释。 表S10:Tajima’s D值小于−3的基因列表。 (文件格式为XLS,大小482 KB)
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2017-06-04
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