single-cell RNAseq data (data set 1) in the publication scFASTCORMICS: A contextualization algorithm to reconstruct metabolic multi-cell population models from single-cell RNAseq data
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下载链接:
https://zenodo.org/record/7294888
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资源简介:
The present dataset (dataset1) was used as input to build scFASTCORMICS models. The files correspond to the clusters identified by Seurat in the single-cell data from CRC samples downloaded from the GEO website (GSE81861).
see the protocol: scFASTCORMICS: A contextualization algorithm to reconstruct metabolic multi-cell population models from single-cell RNAseq data
and github: https://github.com/sysbiolux/scFASTCORMICS
For more information, version updates of the scFASTCORMICS.
本数据集(dataset1)被用作构建单细胞FASTCORMICS(scFASTCORMICS)模型的输入数据。
该数据集内的文件对应从基因表达综合数据库(Gene Expression Omnibus,GEO)网站下载的结直肠癌(Colorectal Cancer,CRC)样本单细胞数据中,经Seurat鉴定得到的细胞簇。
相关研究方案参见:scFASTCORMICS:一种用于从单细胞RNA测序(single-cell RNA sequencing, scRNA-seq)数据中重构代谢多细胞群体模型的情境化算法。
代码仓库:https://github.com/sysbiolux/scFASTCORMICS
如需了解更多信息及scFASTCORMICS的版本更新详情。
创建时间:
2022-11-22



