R package for PanRTK mechanistic signaling model
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https://figshare.com/articles/dataset/R_package_for_PanRTK_mechanistic_signaling_model/5336338
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资源简介:
Signaling pathway model comprised of ODEs describing receptor dimerization and activation of MAPK and PI3K pathways.Data for seven individual cell lines are linked therein.The code is written for the open-source R framework dMod (https://github.com/dkaschek/dMod).
The corresponding paper is available at BioRxiv (http://www.biorxiv.org/content/early/2017/05/27/142901) and in press at npj Systems Biology and Applications.
本数据集包含由常微分方程(Ordinary Differential Equations, ODEs)构建的信号通路模型,用于描述受体二聚化以及丝裂原活化蛋白激酶(Mitogen-Activated Protein Kinase, MAPK)、磷脂酰肌醇3-激酶(Phosphatidylinositol 3-kinase, PI3K)通路的激活过程。其中关联了7种独立细胞系的相关数据。本数据集的代码基于开源R语言框架dMod编写,代码仓库地址为https://github.com/dkaschek/dMod。
相关研究论文可在bioRxiv预印本平台(http://www.biorxiv.org/content/early/2017/05/27/142901)获取,同时已被《npj系统生物学与应用》接收待刊。
创建时间:
2017-08-23



