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Microsatellite (13 loci) and plastid DNA haplotypes in a population of Antirrhinum charidemi

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Zenodo2025-02-27 更新2026-05-29 收录
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Genotype matrix of 182 Antirrhinum charidemi individuals sampled in 2007-2009 in the Barranco del Dragoncillo Blanco population in Cabo de Gata, Almería, Spain. Genotypes are given for 13 microsatellite loci and also include 3 plastid DNA haplotypes. Details on loci and genotyping conditions can be found in Forrest et al. 2017, https://doi.org/10.1093/botlinnean/bow002. Each individual is geolocated. Additional information include its corolla colour, its ancestry score in four gene pools obtained in Bayesian genetic cluster analysis (STRUCTURE), and its assignment to geo-genetic subpopulations. Metadata are available in a separate tab in the submitted spreadsheet. The data are analysed in a paper expected to be published in AoB Plants in 2025, titled: "Fine-scale genetic differentiation in the bee-specialized Antirrhinum charidemi covaries more strongly with microenvironment than with corolla colour"

本数据集为2007至2009年在西班牙阿尔梅里亚省卡波德加塔的布兰科龙谷(Barranco del Dragoncillo Blanco)种群中采集的182株查里德米金鱼草(Antirrhinum charidemi)的基因型矩阵。数据集涵盖13个微卫星位点(microsatellite loci)的基因型数据,同时包含3个质体DNA单倍型(plastid DNA haplotypes)信息。有关位点详情及基因分型实验条件的详细说明,可参阅Forrest等人2017年发表的研究,DOI:10.1093/botlinnean/bow002。所有采样个体均已完成地理定位,附加信息包括其花冠颜色、通过STRUCTURE软件开展的贝叶斯遗传聚类分析得到的4个基因库中的祖先组分得分,以及其归属的地理遗传亚种群。元数据可在提交的电子表格的单独工作表中获取。该数据将用于一篇预计2025年发表于《AoB Plants》的研究论文,论文标题为:“蜜蜂专性传粉的查里德米金鱼草的精细尺度遗传分化与微环境的相关性显著强于其与花冠颜色的相关性”

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2024-11-21
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