Community Package Simillie Dataset
收藏NIAID Data Ecosystem2026-05-01 收录
下载链接:
https://zenodo.org/record/10013293
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资源简介:
The Community package (https://github.com/SoloveyMaria/community) is an R package designed for the analysis of single-cell RNA sequencing data, specifically for inferring interactions between different cell types. The dataset provided here is compatible with the Community tool, allowing for direct utilization.
The dataset associated with this research has undergone peer review and has been published in the journal Cell. The publication can be accessed via the following link: https://doi.org/10.1016/j.cell.2019.06.029. For access to the raw data, please visit: https://singlecell.broadinstitute.org/single_cell/study/SCP259/intra-and-inter-cellular-rewiring-of-the-human-colon-during-ulcerative-colitis?#study-visualize. It's important to note that the data in this repository has undergone batch correction and normalization, and the corresponding metadata has been appropriately adjusted (for detailed insights into the preprocessing steps, you can review the information provided at our paper repository: preprocessing). This processed data serves as the input for the Community tool.
Community工具包(Community package,https://github.com/SoloveyMaria/community)是一款面向单细胞RNA测序数据分析的R语言扩展包,核心功能为推断不同细胞类型间的相互作用。本次提供的数据集与该Community工具兼容,可直接使用。
本研究关联的数据集已通过同行评审,并发表于期刊《Cell》。该论文可通过以下链接获取:https://doi.org/10.1016/j.cell.2019.06.029。若需获取原始数据,请访问:https://singlecell.broadinstitute.org/single_cell/study/SCP259/intra-and-inter-cellular-rewiring-of-the-human-colon-during-ulcerative-colitis?#study-visualize。
特此说明:本仓库中的数据已完成批次校正与标准化处理,对应的元数据也已进行适当调整。若需了解预处理步骤的详细细节,可查阅我们论文仓库中名为preprocessing的相关资料。该经过预处理的数据可作为Community工具的输入文件。
创建时间:
2024-01-15



