遇见数据集

team-indipd-ipsc-bulk-rnaseq-kolf21j-wt

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Zenodo2026-02-25 更新2026-05-26 收录
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This Zenodo deposit contains a publicly available description of the Dataset: Title: "team-indipd-ipsc-bulk-rnaseq-kolf21j-wt". Description: This dataset includes whole transcriptome RNA data from three different technologies, Illumina, ONT, and PacBio. We have Illumina RNA data for iPSC and cortical neuron, PacBio RNA for microglia, and ONT RNA for seven cell types: iPSC, cortical neuron, NGN2-derived neuron, microglia, astrocytes x2, and oligodendrocytes. The illumina and PacBio data was generated at Psomagen while the ONT data was generated at the Center for Alzheimer's and Related Dementias within NIH. PacBio RNA data is Kinnex while ONT data is the R9 chemistry. Average data output per technology includes: Illumina ~18Gb at 150bp, PacBio 134 gb at 1.81 kb, and ONT 16-87Gb at ~1.3kb. This dataset is made available to researchers via the ASAP CRN Cloud: cloud.parkinsonsroadmap.org. Instructions for how to request access can be found in the User Manual. This research was funded by the Aligning Science Across Parkinson's Collaborative Research Network (ASAP CRN), through the Michael J. Fox Foundation for Parkinson's Research (MJFF). This Zenodo deposit was created by the ASAP CRN Cloud staff on behalf of the dataset authors. It provides a citable reference for a CRN Cloud Dataset

本Zenodo存档包含某数据集的公开说明,数据集标题为"team-indipd-ipsc-bulk-rnaseq-kolf21j-wt"。 本数据集涵盖三种不同技术的全转录组RNA测序数据,分别为Illumina、ONT与PacBio。其中,Illumina RNA数据覆盖诱导多能干细胞(induced pluripotent stem cell, iPSC)与皮层神经元样本;PacBio RNA数据针对小胶质细胞样本;ONT RNA数据则覆盖7种细胞类型:iPSC、皮层神经元、NGN2诱导神经元、小胶质细胞、2份星形胶质细胞样本以及少突胶质细胞。Illumina与PacBio数据由Psomagen公司生成,而ONT数据由美国国立卫生研究院(National Institutes of Health, NIH)下属阿尔茨海默病及相关痴呆症研究中心生成。PacBio RNA数据采用Kinnex建库方案,ONT数据采用R9测序化学试剂。各技术的平均数据产出如下:Illumina平台约18Gb,读长150bp;PacBio平台约134Gb,平均读长1.81 kb;ONT平台约16~87Gb,平均读长约1.3kb。 本数据集通过帕金森病研究对齐科学协作网络云平台(ASAP CRN Cloud)向研究者开放,访问地址为cloud.parkinsonsroadmap.org。申请访问权限的具体说明可参阅用户手册。 本研究由帕金森病研究对齐科学协作网络(Aligning Science Across Parkinson's Collaborative Research Network, ASAP CRN)通过迈克尔·J·福克斯帕金森病研究基金会(Michael J. Fox Foundation for Parkinson's Research, MJFF)资助。 本Zenodo存档由ASAP CRN Cloud工作人员代表数据集作者创建,可为该CRN云平台数据集提供可引用的文献依据。

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Zenodo
创建时间:
2026-02-25
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