Supplementary Information – Phylogeography and genetic diversity of the Serrated Hinge-back Tortoise Kinixys erosa (Schweigger, 1812): implications for taxonomy and conservation. Zootaxa

Table S1. Studied samples and sequences downloaded from GenBank. Numbers of Kinixys erosa samples included in the subset are shown in bold. Samples are housed in the tissue collection of the Museum of Zoology, Senckenberg Dresden.Table S2. Primers used for amplifying and sequencing DNA fragments for Kinixys.Table S3. Partitions and evolutionary models for the mitochondrial alignment inferred by PartitionFinder 2 (Lanfear et al. 2017) using the Bayesian Information Criterion.Table S4. Number of alleles (nA) and number of private alleles (nAP) for parsimony networks of phased nuclear sequences for the dataset containing all hinge-back tortoises.Figure S1. Parsimony networks for three phased nuclear loci of Kinixys. Symbol size corresponds to allele frequency; lines connecting alleles represent a single mutation step if not indicated otherwise by numbers. Colors of circles correspond to lineages of Figure 1. Small white circles are missing alleles.Figure S2. Parsimony networks for alleles of 17 nuclear loci of Kinixys erosa. Symbol size corresponds to allele frequency; lines connecting alleles represent a single mutation step. Colors correspond to Figures 1 and 2; small white circles are missing alleles. The most variable loci are HBMG2, P26S4, ODC, PAX1P1, R35, RAG2, TB82, TB53, and TB73.

表S1。从GenBank（基因银行）下载的本研究涉及的样本与序列。子集内的平腹陆龟（Kinixys erosa）样本量以粗体标注。所有样本均保存于德累斯顿森肯伯格动物学博物馆的组织标本馆藏中。
表S2。用于扩增并测序平腹陆龟DNA片段的引物。
表S3。通过贝叶斯信息准则（Bayesian Information Criterion），由PartitionFinder 2（Lanfear等人，2017）推导得到的线粒体序列比对分区方案与进化模型。
表S4。涵盖所有铰链背陆龟的数据集的定相核序列简约网络图的等位基因数（nA）与私有等位基因数（nAP）。
图S1。平腹陆龟3个定相核基因座的简约网络图。符号大小代表等位基因频率；若无数字标注，等位基因间的连线表示1个突变步骤。圆圈颜色对应图1的支系；白色小圆圈代表缺失等位基因。
图S2。平腹陆龟17个核基因座等位基因的简约网络图。符号大小代表等位基因频率；等位基因间的连线表示1个突变步骤。圆圈颜色对应图1与图2；白色小圆圈代表缺失等位基因。多态性最高的基因座为HBMG2、P26S4、ODC、PAX1P1、R35、RAG2、TB82、TB53及TB73。