c-Fos bound proximal regions are enriched by CCAAT box motifs.
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https://figshare.com/articles/dataset/c-Fos_bound_proximal_regions_are_enriched_by_CCAAT_box_motifs_/3580272
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资源简介:
Proportion of CCAAT box motif occurrence in proximal and distal genomic ChIP-seq intervals bound by c-Fos, but not by NF-YB are shown. Proximal (p) and distal (d) genomic intervals targeted by c-Fos, but not by NF-YB (column c-Fos of Table 1) differ significantly in the occurrence of the CCAAT box motifs detected by an NF-Y PWM (Fig 1); CCAAT+: number of intervals with, CCAAT−: without a detectable CCAAT box motif. In the last column the Fisher’s Exact Odds Ratios (OR, bold) and the corresponding P-values (in parentheses) are given.
本研究展示了仅结合c-Fos而非NF-YB的基因组近端与远端染色质免疫共沉淀测序(ChIP-seq)区间内CCAAT盒基序(CCAAT box motif)的出现比例。仅由c-Fos结合且未被NF-YB结合的近端(标注为p)与远端(标注为d)基因组区间(对应表1的c-Fos列),在经NF-Y位置权重矩阵(Position Weight Matrix,PWM)检测到的CCAAT盒基序出现频率上存在显著差异(见图1);其中CCAAT+代表携带可检测CCAAT盒基序的区间数目,CCAAT−代表未携带可检测CCAAT盒基序的区间数目。最后一列给出了费希尔精确检验比值比(Odds Ratio,OR,以粗体标注)及其对应的P值(标注于括号内)。
创建时间:
2016-08-13



